STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM58981.1Hypothetical protein; COG0457 FOG: TPR repeat. (109 aa)    
Predicted Functional Partners:
AHM61766.1
COG2386 ABC-type transport system involved in cytochrome c biogenesis, permease component.
  
     0.692
AHM59035.1
Surface antigen variable number repeat-containing protein; COG4775 Outer membrane protein/protective antigen OMA87.
  
     0.648
AHM61762.1
COG1138 Cytochrome c biogenesis factor.
  
     0.611
AHM58447.1
Hypothetical protein.
  
    0.605
AHM58980.1
COG2086 Electron transfer flavoprotein, beta subunit.
       0.597
AHM58837.1
Hypothetical protein; COG0135 Phosphoribosylanthranilate isomerase.
 
     0.588
AHM59024.1
Hypothetical protein.
  
     0.575
AHM58978.1
Hypothetical protein.
   
   0.533
AHM61763.1
Hypothetical protein; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH.
  
     0.533
AHM61527.1
Hypothetical protein; COG0457 FOG: TPR repeat.
 
    0.525
Your Current Organism:
Flammeovirgaceae bacterium 311
NCBI taxonomy Id: 1257021
Other names: F. bacterium 311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.