STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM59011.1PspC domain-containing protein; COG1983 Putative stress-responsive transcriptional regulator. (71 aa)    
Predicted Functional Partners:
AHM61696.1
pspA/IM30 family protein; COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription.
  
 
 0.864
AHM59022.1
COG0642 Signal transduction histidine kinase.
  
 
 0.847
AHM58906.1
COG0642 Signal transduction histidine kinase.
   
 
 0.846
AHM61992.1
Multi-sensor hybrid histidine kinase; COG2202 FOG: PAS/PAC domain.
   
 
 0.846
AHM59874.1
Hypothetical protein.
 
    0.688
AHM58954.1
COG1950 Predicted membrane protein.
  
    0.644
AHM61849.1
Hypothetical protein.
  
     0.633
AHM60673.1
Hypothetical protein.
  
     0.562
AHM60615.1
Signal transduction histidine kinase; COG2203 FOG: GAF domain.
  
 
 0.552
AHM58603.1
Hypothetical protein.
   
 
 0.551
Your Current Organism:
Flammeovirgaceae bacterium 311
NCBI taxonomy Id: 1257021
Other names: F. bacterium 311
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.