STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM59036.1Peptidase S46; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides. (737 aa)    
Predicted Functional Partners:
AHM59035.1
Surface antigen variable number repeat-containing protein; COG4775 Outer membrane protein/protective antigen OMA87.
       0.651
AHM60017.1
Hypothetical protein; COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
  
     0.597
AHM60016.1
Hypothetical protein.
  
     0.526
AHM59852.1
Hypothetical protein.
  
     0.450
AHM59376.1
TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
     0.430
AHM62099.1
COG2234 Predicted aminopeptidases.
 
  
 0.430
AHM62080.1
Oligoendopeptidase F; COG2317 Zn-dependent carboxypeptidase.
  
     0.427
AHM62568.1
COG0810 Periplasmic protein TonB, links inner and outer membranes.
  
     0.401
AHM62079.1
Peptidase M28; COG2234 Predicted aminopeptidases.
 
  
 0.400
Your Current Organism:
Flammeovirgaceae bacterium 311
NCBI taxonomy Id: 1257021
Other names: F. bacterium 311
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.