STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM59703.1FG-GAP repeat-containing protein. (1200 aa)    
Predicted Functional Partners:
AHM60813.1
PA-phosphatase-like phosphodiesterase.
 
    0.783
AHM60879.1
PAP2 superfamily protein; COG0671 Membrane-associated phospholipid phosphatase.
 
    0.783
AHM61861.1
Phosphoesterase pa-phosphatase related protein; COG0671 Membrane-associated phospholipid phosphatase.
 
    0.783
AHM62051.1
PA-phosphatase-like phosphoesterase; COG0671 Membrane-associated phospholipid phosphatase.
 
     0.769
AHM62050.1
Hypothetical protein.
  
     0.743
AHM61858.1
RagB/SusD domain protein; COG0469 Pyruvate kinase.
 
 
   0.667
AHM60886.1
RagB/SusD domain-containing protein.
  
    0.587
AHM63458.1
Hypothetical protein; COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases.
  
 
   0.521
AHM60887.1
TonB-dependent receptor plug; COG4206 Outer membrane cobalamin receptor protein.
  
     0.518
AHM63037.1
Hypothetical protein.
  
 
   0.500
Your Current Organism:
Flammeovirgaceae bacterium 311
NCBI taxonomy Id: 1257021
Other names: F. bacterium 311
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