STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM59778.1COG3741 N-formylglutamate amidohydrolase. (289 aa)    
Predicted Functional Partners:
AHM59777.1
COG3930 Uncharacterized protein conserved in bacteria.
     0.957
gshB
COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); Belongs to the prokaryotic GSH synthase family.
 
   
 0.933
hutG
Formiminoglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family.
    
 0.903
AHM60620.1
Arginase/agmatinase/formiminoglutamase; COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; Belongs to the arginase family.
    
 0.903
AHM63264.1
COG0067 Glutamate synthase domain 1.
     
 0.812
AHM61364.1
Beta-aspartyl-peptidase; COG1446 Asparaginase.
    
  0.806
AHM61853.1
Delta-1-pyrroline-5-carboxylate dehydrogenase, group 1; COG1012 NAD-dependent aldehyde dehydrogenases.
     
 0.805
AHM58434.1
COG0367 Asparagine synthase (glutamine-hydrolyzing).
     
  0.800
AHM58533.1
COG1882 Pyruvate-formate lyase.
     
  0.800
AHM58869.1
Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.
     
  0.800
Your Current Organism:
Flammeovirgaceae bacterium 311
NCBI taxonomy Id: 1257021
Other names: F. bacterium 311
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