STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM59969.1Hypothetical protein; COG0457 FOG: TPR repeat. (504 aa)    
Predicted Functional Partners:
AHM59970.1
COG0408 Coproporphyrinogen III oxidase.
     
 0.779
AHM60224.1
Hypothetical protein; COG0457 FOG: TPR repeat.
 
 
 0.596
AHM58848.1
Hypothetical protein; COG0457 FOG: TPR repeat.
 
     0.577
AHM62005.1
Heat shock protein dnaj domain protein; COG2214 DnaJ-class molecular chaperone.
  
 
 0.571
AHM59968.1
Transketolase central region; COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit.
     
 0.542
AHM58279.1
Amino acid adenylation protein; COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.536
AHM60260.1
WD40 repeat-containing protein; COG2319 FOG: WD40 repeat.
 
 0.535
AHM60308.1
Miro domain-containing protein; COG4886 Leucine-rich repeat (LRR) protein.
 
 
 0.528
AHM63257.1
GAF sensor hybrid histidine kinase; COG2770 FOG: HAMP domain.
  
 
 0.526
AHM59366.1
Hypothetical protein; COG0457 FOG: TPR repeat.
 
     0.520
Your Current Organism:
Flammeovirgaceae bacterium 311
NCBI taxonomy Id: 1257021
Other names: F. bacterium 311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.