STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM60401.1COG0436 Aspartate/tyrosine/aromatic aminotransferase. (398 aa)    
Predicted Functional Partners:
AHM62112.1
COG1605 Chorismate mutase.
 
 
 0.988
AHM63264.1
COG0067 Glutamate synthase domain 1.
  
 
 0.939
AHM62405.1
COG0137 Argininosuccinate synthase.
 
 0.929
AHM60678.1
COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases.
  
 
 0.916
AHM63488.1
COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins.
   
 
 0.916
AHM61853.1
Delta-1-pyrroline-5-carboxylate dehydrogenase, group 1; COG1012 NAD-dependent aldehyde dehydrogenases.
   
 0.915
AHM62427.1
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate.
  
 0.914
mdh
Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
  
 0.914
hisC
COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
  
 
0.913
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
 0.913
Your Current Organism:
Flammeovirgaceae bacterium 311
NCBI taxonomy Id: 1257021
Other names: F. bacterium 311
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