STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM60412.1COG1846 Transcriptional regulators. (155 aa)    
Predicted Functional Partners:
AHM62283.1
Hypothetical protein.
  
     0.453
AHM58981.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
     0.424
AHM61127.1
COG4206 Outer membrane cobalamin receptor protein.
  
     0.412
AHM60854.1
TonB-dependent receptor plug; COG4771 Outer membrane receptor for ferrienterochelin and colicins.
  
     0.409
AHM60411.1
Membrane protein.
     
 0.408
AHM60714.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.406
Your Current Organism:
Flammeovirgaceae bacterium 311
NCBI taxonomy Id: 1257021
Other names: F. bacterium 311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.