STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM60415.1Hypothetical protein; COG0477 Permeases of the major facilitator superfamily. (148 aa)    
Predicted Functional Partners:
upp
COG0035 Uracil phosphoribosyltransferase.
       0.794
AHM60416.1
Na+/ca+ antiporter, caca family protein; COG0530 Ca2+/Na+ antiporter.
       0.790
AHM62274.1
SH3 domain-containing protein; COG0457 FOG: TPR repeat.
  
     0.771
AHM58837.1
Hypothetical protein; COG0135 Phosphoribosylanthranilate isomerase.
  
     0.768
AHM62197.1
Hypothetical protein.
  
     0.768
AHM59530.1
Hypothetical protein.
  
     0.766
AHM59926.1
Hypothetical protein; COG5023 Tubulin.
  
     0.766
AHM60785.1
COG2849 Uncharacterized protein conserved in bacteria.
  
     0.758
AHM61966.1
Hypothetical protein.
  
     0.748
AHM63653.1
Hypothetical protein.
  
     0.746
Your Current Organism:
Flammeovirgaceae bacterium 311
NCBI taxonomy Id: 1257021
Other names: F. bacterium 311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.