STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM60468.1AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins. (306 aa)    
Predicted Functional Partners:
AHM59530.1
Hypothetical protein.
  
     0.766
AHM62197.1
Hypothetical protein.
  
     0.763
AHM58837.1
Hypothetical protein; COG0135 Phosphoribosylanthranilate isomerase.
  
     0.751
AHM59926.1
Hypothetical protein; COG5023 Tubulin.
  
     0.742
AHM60785.1
COG2849 Uncharacterized protein conserved in bacteria.
  
     0.740
AHM61656.1
Hypothetical protein.
  
     0.728
AHM62274.1
SH3 domain-containing protein; COG0457 FOG: TPR repeat.
  
     0.727
AHM60415.1
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
  
     0.726
AHM62655.1
AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.714
AHM60733.1
Gas vesicle protein.
  
     0.703
Your Current Organism:
Flammeovirgaceae bacterium 311
NCBI taxonomy Id: 1257021
Other names: F. bacterium 311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.