STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM60469.1Geranylgeranylglyceryl phosphate synthase-like protein; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P). (257 aa)    
Predicted Functional Partners:
ubiA
Prenyltransferase; COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases.
 
  
 0.978
AHM59402.1
COG1215 Glycosyltransferases, probably involved in cell wall biogenesis.
  
     0.713
AHM61841.1
Hypothetical protein.
  
     0.712
AHM63288.1
O-methyltransferase-like protein; COG4122 Predicted O-methyltransferase.
  
    0.696
AHM63371.1
COG1215 Glycosyltransferases, probably involved in cell wall biogenesis.
  
     0.689
AHM59914.1
COG4122 Predicted O-methyltransferase.
  
    0.675
AHM62563.1
Hypothetical protein.
  
     0.643
AHM61585.1
Radical SAM domain protein; COG0535 Predicted Fe-S oxidoreductases.
  
     0.613
AHM61065.1
COG0760 Parvulin-like peptidyl-prolyl isomerase.
  
     0.537
AHM59525.1
COG1131 ABC-type multidrug transport system, ATPase component.
  
     0.536
Your Current Organism:
Flammeovirgaceae bacterium 311
NCBI taxonomy Id: 1257021
Other names: F. bacterium 311
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