STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM60757.1alpha-L-rhamnosidase. (793 aa)    
Predicted Functional Partners:
AHM60758.1
Hypothetical protein.
       0.773
AHM61167.1
alpha-L-rhamnosidase.
 
     0.729
AHM58389.1
alpha-L-rhamnosidase.
 
     0.725
AHM62286.1
COG0058 Glucan phosphorylase.
  
 
 0.677
AHM60759.1
Hypothetical protein; Belongs to the glycosyl hydrolase 2 family.
  
    0.670
AHM62198.1
Oxidoreductase domain-containing protein; COG0673 Predicted dehydrogenases and related proteins.
  
     0.668
AHM61171.1
Tat pathway signal sequence domain-containing protein.
 
     0.658
AHM60756.1
Putative xanthan lyase; COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes.
 
     0.623
AHM60761.1
COG3394 Uncharacterized protein conserved in bacteria.
 
     0.570
AHM62963.1
COG0823 Periplasmic component of the Tol biopolymer transport system.
  
     0.530
Your Current Organism:
Flammeovirgaceae bacterium 311
NCBI taxonomy Id: 1257021
Other names: F. bacterium 311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.