Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AHM59027.1 | AHM60789.1 | D770_03800 | D770_12675 | COG0469 Pyruvate kinase; Belongs to the pyruvate kinase family. | Outer membrane zinc-dependent metalloprotease, putative. | 0.588 |
AHM59027.1 | AHM62047.1 | D770_03800 | D770_18980 | COG0469 Pyruvate kinase; Belongs to the pyruvate kinase family. | COG0469 Pyruvate kinase. | 0.926 |
AHM60789.1 | AHM59027.1 | D770_12675 | D770_03800 | Outer membrane zinc-dependent metalloprotease, putative. | COG0469 Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.588 |
AHM60789.1 | AHM60790.1 | D770_12675 | D770_12680 | Outer membrane zinc-dependent metalloprotease, putative. | Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR; COG0642 Signal transduction histidine kinase. | 0.538 |
AHM60789.1 | AHM60791.1 | D770_12675 | D770_12685 | Outer membrane zinc-dependent metalloprotease, putative. | COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | 0.533 |
AHM60789.1 | AHM62047.1 | D770_12675 | D770_18980 | Outer membrane zinc-dependent metalloprotease, putative. | COG0469 Pyruvate kinase. | 0.588 |
AHM60790.1 | AHM60789.1 | D770_12680 | D770_12675 | Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR; COG0642 Signal transduction histidine kinase. | Outer membrane zinc-dependent metalloprotease, putative. | 0.538 |
AHM60790.1 | AHM60791.1 | D770_12680 | D770_12685 | Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR; COG0642 Signal transduction histidine kinase. | COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | 0.959 |
AHM60791.1 | AHM60789.1 | D770_12685 | D770_12675 | COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | Outer membrane zinc-dependent metalloprotease, putative. | 0.533 |
AHM60791.1 | AHM60790.1 | D770_12685 | D770_12680 | COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR; COG0642 Signal transduction histidine kinase. | 0.959 |
AHM62047.1 | AHM59027.1 | D770_18980 | D770_03800 | COG0469 Pyruvate kinase. | COG0469 Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.926 |
AHM62047.1 | AHM60789.1 | D770_18980 | D770_12675 | COG0469 Pyruvate kinase. | Outer membrane zinc-dependent metalloprotease, putative. | 0.588 |