STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM61143.1Phytanoyl-CoA dioxygenase; COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin. (300 aa)    
Predicted Functional Partners:
AHM58279.1
Amino acid adenylation protein; COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
  
 0.673
AHM61142.1
COG0627 Predicted esterase.
 
     0.576
AHM63665.1
Linear pentadecapeptide gramicidin synthetase LgrD; COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
  
 0.485
AHM63041.1
Hypothetical protein; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily.
  
     0.453
AHM61911.1
Xylose isomerase domain-containing protein; COG1082 Sugar phosphate isomerases/epimerases.
 
     0.449
AHM60260.1
WD40 repeat-containing protein; COG2319 FOG: WD40 repeat.
  
     0.400
Your Current Organism:
Flammeovirgaceae bacterium 311
NCBI taxonomy Id: 1257021
Other names: F. bacterium 311
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.