STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM61298.1Ompa/motb domain protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. (660 aa)    
Predicted Functional Partners:
AHM61582.1
Hypothetical protein.
  
 
   0.697
AHM60013.1
Membrane protein.
 
     0.683
AHM60500.1
Hypothetical protein.
  
     0.636
AHM61406.1
Tetratricopeptide domain protein; COG0457 FOG: TPR repeat.
 
  
 0.618
AHM61040.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
 
   0.605
AHM61299.1
Ompa/motb domain protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
 
    
0.572
AHM61741.1
Hypothetical protein.
  
   0.563
AHM59771.1
Membrane protein.
 
     0.555
AHM61043.1
Gliding motility associated protein gldn.
  
     0.550
AHM58659.1
Hypothetical protein.
  
   0.546
Your Current Organism:
Flammeovirgaceae bacterium 311
NCBI taxonomy Id: 1257021
Other names: F. bacterium 311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.