STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM61354.1COG0693 Putative intracellular protease/amidase. (204 aa)    
Predicted Functional Partners:
AHM63245.1
COG2032 Cu/Zn superoxide dismutase.
  
 
 0.523
AHM60225.1
Hypothetical protein.
  
 
 0.512
AHM61355.1
Hypothetical protein; COG1073 Hydrolases of the alpha/beta superfamily.
       0.471
AHM61356.1
Hypothetical protein.
       0.465
AHM58985.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 
 0.450
AHM60081.1
COG0753 Catalase; Belongs to the catalase family.
  
 
 0.450
AHM59598.1
COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit.
   
 
 0.449
rpsJ
30S ribosomal protein S10p; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
  
   0.446
rplN
50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
    
   0.414
AHM59860.1
COG0450 Peroxiredoxin.
   
 
 0.409
Your Current Organism:
Flammeovirgaceae bacterium 311
NCBI taxonomy Id: 1257021
Other names: F. bacterium 311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.