STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM61379.1Pas sensor protein; COG2202 FOG: PAS/PAC domain. (575 aa)    
Predicted Functional Partners:
AHM58906.1
COG0642 Signal transduction histidine kinase.
 
 0.874
AHM63257.1
GAF sensor hybrid histidine kinase; COG2770 FOG: HAMP domain.
 
 
0.864
AHM58867.1
COG0642 Signal transduction histidine kinase.
 
0.811
AHM59022.1
COG0642 Signal transduction histidine kinase.
 
 0.811
AHM60157.1
Response regulator receiver sensor signal transduction histidine kinase; COG0784 FOG: CheY-like receiver.
 
 
   0.792
AHM59023.1
Sensor for ctr capsule biosynthesis, histidine kinase acting on RcsB; COG0784 FOG: CheY-like receiver.
  
   0.783
AHM63629.1
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains; COG0784 FOG: CheY-like receiver.
  
 
   0.781
AHM59646.1
Sensor protein; COG0642 Signal transduction histidine kinase.
  
0.757
AHM58877.1
Histidine kinase; COG0457 FOG: TPR repeat.
  
 
   0.746
AHM60791.1
COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
 
   0.701
Your Current Organism:
Flammeovirgaceae bacterium 311
NCBI taxonomy Id: 1257021
Other names: F. bacterium 311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.