STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM61468.1COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs. (496 aa)    
Predicted Functional Partners:
AHM61466.1
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein; COG3467 Predicted flavin-nucleotide-binding protein.
 
    0.738
AHM61467.1
Isochorismatase hydrolase; COG1335 Amidases related to nicotinamidase.
  
  
 0.563
AHM62517.1
NGG1p interacting factor 3 protein, NIF3; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.
   
    0.547
AHM62780.1
COG1725 Predicted transcriptional regulators.
 
   
 0.487
AHM61469.1
Hypothetical protein.
       0.447
Your Current Organism:
Flammeovirgaceae bacterium 311
NCBI taxonomy Id: 1257021
Other names: F. bacterium 311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.