STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM61513.1COG2866 Predicted carboxypeptidase. (607 aa)    
Predicted Functional Partners:
AHM61514.1
COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.
       0.723
AHM58279.1
Amino acid adenylation protein; COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
  
 0.464
AHM61515.1
Hypothetical protein.
       0.463
AHM63069.1
Hypothetical protein; COG0583 Transcriptional regulator.
  
     0.444
AHM59037.1
Regulatory P domain of subtilisin-like proprotein convertases.
  
  
 0.439
AHM62393.1
Glycosyl hydrolase bnr repeat-containing protein; COG4409 Neuraminidase (sialidase).
 
     0.427
AHM59071.1
Hypothetical protein.
 
   0.413
AHM63474.1
Hypothetical protein.
  
     0.409
AHM63240.1
Pregnancy-associated plasma protein-A.
 
   0.402
Your Current Organism:
Flammeovirgaceae bacterium 311
NCBI taxonomy Id: 1257021
Other names: F. bacterium 311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.