STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM61611.1COG3279 Response regulator of the LytR/AlgR family. (253 aa)    
Predicted Functional Partners:
AHM61612.1
Putative two-component sensor histidine kinase transcriptional regulator; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.
 
   0.956
AHM58761.1
Two-component system-sensor histidine kinase; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.
 
   0.817
AHM60092.1
Signal transduction histidine kinase LytS; COG3275 Putative regulator of cell autolysis.
 
   0.817
AHM61557.1
COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.
 
   0.817
AHM61558.1
Signal transduction histidine kinase; COG3275 Putative regulator of cell autolysis.
 
   0.817
AHM62891.1
Signal transduction histidine kinase LytS; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.
 
   0.816
AHM58810.1
Signal transduction histidine kinase; COG3275 Putative regulator of cell autolysis.
  
   0.812
AHM59445.1
Two-component system sensor histidine kinase; COG3275 Putative regulator of cell autolysis.
  
   0.812
AHM60716.1
Signal transduction histidine kinase LytS; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.
  
   0.812
AHM61646.1
Signal transduction histidine kinase, lyts; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.
  
   0.812
Your Current Organism:
Flammeovirgaceae bacterium 311
NCBI taxonomy Id: 1257021
Other names: F. bacterium 311
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