STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM61706.1Peptidase M1 membrane alanine aminopeptidase; COG0308 Aminopeptidase N. (551 aa)    
Predicted Functional Partners:
AHM62540.1
Hypothetical protein.
  
     0.586
AHM61705.1
Haloacid dehalogenase superfamily protein; COG0546 Predicted phosphatases.
       0.541
AHM61707.1
Mandelate racemase/muconate lactonizing family protein; COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily.
       0.461
AHM59569.1
Orn/DAP/Arg decarboxylase 2; COG1166 Arginine decarboxylase (spermidine biosynthesis).
  
     0.422
Your Current Organism:
Flammeovirgaceae bacterium 311
NCBI taxonomy Id: 1257021
Other names: F. bacterium 311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.