STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM61955.1SprT-like family protein; COG3091 Uncharacterized protein conserved in bacteria. (241 aa)    
Predicted Functional Partners:
bshC
COG4365 Uncharacterized protein conserved in bacteria; Belongs to the BshC family.
 
     0.741
AHM61075.1
Hypothetical protein.
  
     0.624
AHM61957.1
COG0212 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
 
     0.616
AHM63605.1
Hypothetical protein.
  
     0.596
AHM61397.1
Polysaccharide biosynthesis protein; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid.
 
     0.588
AHM61819.1
Hypothetical protein.
  
     0.584
AHM61240.1
Hypothetical protein.
  
     0.545
AHM59441.1
Hypothetical protein.
  
     0.541
AHM59532.1
Lysine exporter protein (lyse/ygga); COG1280 Putative threonine efflux protein.
  
     0.486
AHM59178.1
Gliding motility-associated protein gldc.
  
     0.483
Your Current Organism:
Flammeovirgaceae bacterium 311
NCBI taxonomy Id: 1257021
Other names: F. bacterium 311
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