STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM62103.1COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems. (204 aa)    
Predicted Functional Partners:
AHM63636.1
Heme/copper-type cytochrome/quinol oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.838
AHM62104.1
COG1981 Predicted membrane protein.
       0.786
AHM63644.1
COG2322 Predicted membrane protein.
 
  
 0.725
AHM63637.1
COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.647
AHM63641.1
COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3.
 
  
 0.637
ctaB
Protoheme ix farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
  
 0.593
AHM62102.1
Nitrite reductase (NO-forming); COG2010 Cytochrome c, mono- and diheme variants.
 
  
 0.586
AHM63638.1
Cytochrome oxidase assembly; COG1612 Uncharacterized protein required for cytochrome oxidase assembly.
 
 
 0.542
AHM61815.1
Hypothetical protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
 
 
 0.533
AHM61222.1
Redoxin domain-containing protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
 
 
 0.531
Your Current Organism:
Flammeovirgaceae bacterium 311
NCBI taxonomy Id: 1257021
Other names: F. bacterium 311
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