STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM62199.1Hypothetical protein. (365 aa)    
Predicted Functional Partners:
AHM62198.1
Oxidoreductase domain-containing protein; COG0673 Predicted dehydrogenases and related proteins.
 
     0.899
AHM58279.1
Amino acid adenylation protein; COG1020 Non-ribosomal peptide synthetase modules and related proteins.
    
 
 0.814
AHM63665.1
Linear pentadecapeptide gramicidin synthetase LgrD; COG1020 Non-ribosomal peptide synthetase modules and related proteins.
    
 
 0.736
AHM63264.1
COG0067 Glutamate synthase domain 1.
    
 
 0.703
AHM63033.1
Hypothetical protein.
  
     0.675
AHM60844.1
Membrane-bound dehydrogenase domain-containing protein; COG3828 Uncharacterized protein conserved in bacteria.
  
     0.646
AHM60756.1
Putative xanthan lyase; COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes.
  
     0.640
AHM62962.1
NIPSNAP family containing protein.
  
     0.602
AHM63051.1
Hypothetical protein; COG0673 Predicted dehydrogenases and related proteins.
 
     0.597
AHM63037.1
Hypothetical protein.
 
     0.530
Your Current Organism:
Flammeovirgaceae bacterium 311
NCBI taxonomy Id: 1257021
Other names: F. bacterium 311
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