STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
agaSTagatose-6-phosphate ketose/aldose isomerase; COG2222 Predicted phosphosugar isomerases. (378 aa)    
Predicted Functional Partners:
AHM62263.1
COG0524 Sugar kinases, ribokinase family.
 
  
 0.882
AHM62260.1
COG1349 Transcriptional regulators of sugar metabolism.
 
  
 0.851
AHM62264.1
COG0191 Fructose/tagatose bisphosphate aldolase.
 
  
 0.845
AHM62262.1
Hypothetical protein; COG4573 Predicted tagatose 6-phosphate kinase.
 
  
 0.812
AHM62265.1
Amidohydrolase; COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold.
 
     0.804
AHM62266.1
Glycoside hydrolase clan GH-D; COG3345 Alpha-galactosidase.
 
     0.797
AHM63041.1
Hypothetical protein; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily.
 
     0.760
AHM63039.1
Amidohydrolase; COG0413 Ketopantoate hydroxymethyltransferase.
 
     0.731
AHM63021.1
COG1820 N-acetylglucosamine-6-phosphate deacetylase.
 
  
 0.494
AHM63320.1
COG1820 N-acetylglucosamine-6-phosphate deacetylase.
 
  
 0.450
Your Current Organism:
Flammeovirgaceae bacterium 311
NCBI taxonomy Id: 1257021
Other names: F. bacterium 311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.