STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM62438.1Hypothetical protein. (468 aa)    
Predicted Functional Partners:
AHM62437.1
TonB-linked outer membrane protein, SusC/RagA family; COG4206 Outer membrane cobalamin receptor protein.
 
 
 0.920
AHM63593.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
 
 0.826
AHM62203.1
Hypothetical protein; COG4771 Outer membrane receptor for ferrienterochelin and colicins.
     0.709
AHM62439.1
Hypothetical protein.
       0.683
AHM63270.1
COG4771 Outer membrane receptor for ferrienterochelin and colicins.
     0.652
AHM63295.1
parB-like partition protein; COG1475 Predicted transcriptional regulators; Belongs to the ParB family.
  
 
 0.645
AHM63168.1
RagB/SusD domain-containing protein.
  
 
   0.524
AHM63014.1
TonB-dependent receptor plug; COG4771 Outer membrane receptor for ferrienterochelin and colicins.
     0.523
AHM61857.1
COG4771 Outer membrane receptor for ferrienterochelin and colicins.
 
     0.509
AHM60887.1
TonB-dependent receptor plug; COG4206 Outer membrane cobalamin receptor protein.
  
 
   0.476
Your Current Organism:
Flammeovirgaceae bacterium 311
NCBI taxonomy Id: 1257021
Other names: F. bacterium 311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.