STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM62506.1COG0577 ABC-type antimicrobial peptide transport system, permease component. (413 aa)    
Predicted Functional Partners:
AHM60502.1
COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
   0.985
AHM63114.1
Phosphonate-transporting ATPase; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
   0.981
AHM62852.1
Phosphonate-transporting ATPase; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
   0.980
AHM62874.1
COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
   0.979
AHM63347.1
ABC transporter related protein; COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component.
   0.957
lolD-2
Phosphonate-transporting ATPase; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
   0.955
lolD
ABC transporter; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
   0.952
AHM59768.1
Cell division ATPase; COG2884 Predicted ATPase involved in cell division.
 
      0.896
AHM62123.1
COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component.
 
      0.896
AHM61015.1
COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
 
    0.877
Your Current Organism:
Flammeovirgaceae bacterium 311
NCBI taxonomy Id: 1257021
Other names: F. bacterium 311
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.