Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AHM58568.1 | AHM61119.1 | D770_01470 | D770_14325 | COG0739 Membrane proteins related to metalloendopeptidases. | Hypothetical protein; COG0457 FOG: TPR repeat. | 0.402 |
| AHM58568.1 | AHM62538.1 | D770_01470 | D770_21445 | COG0739 Membrane proteins related to metalloendopeptidases. | C-terminal processing peptidase-3; COG0793 Periplasmic protease; Belongs to the peptidase S41A family. | 0.485 |
| AHM58568.1 | AHM62576.1 | D770_01470 | D770_21645 | COG0739 Membrane proteins related to metalloendopeptidases. | COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains). | 0.523 |
| AHM61119.1 | AHM58568.1 | D770_14325 | D770_01470 | Hypothetical protein; COG0457 FOG: TPR repeat. | COG0739 Membrane proteins related to metalloendopeptidases. | 0.402 |
| AHM61119.1 | AHM62538.1 | D770_14325 | D770_21445 | Hypothetical protein; COG0457 FOG: TPR repeat. | C-terminal processing peptidase-3; COG0793 Periplasmic protease; Belongs to the peptidase S41A family. | 0.542 |
| AHM61119.1 | AHM62576.1 | D770_14325 | D770_21645 | Hypothetical protein; COG0457 FOG: TPR repeat. | COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains). | 0.402 |
| AHM61119.1 | AHM62581.1 | D770_14325 | D770_21670 | Hypothetical protein; COG0457 FOG: TPR repeat. | Tetratricopeptide TPR_1 repeat-containing protein; COG0457 FOG: TPR repeat. | 0.538 |
| AHM61406.1 | AHM62538.1 | D770_15760 | D770_21445 | Tetratricopeptide domain protein; COG0457 FOG: TPR repeat. | C-terminal processing peptidase-3; COG0793 Periplasmic protease; Belongs to the peptidase S41A family. | 0.487 |
| AHM61406.1 | AHM62542.1 | D770_15760 | D770_21465 | Tetratricopeptide domain protein; COG0457 FOG: TPR repeat. | Hypothetical protein. | 0.800 |
| AHM61406.1 | AHM62581.1 | D770_15760 | D770_21670 | Tetratricopeptide domain protein; COG0457 FOG: TPR repeat. | Tetratricopeptide TPR_1 repeat-containing protein; COG0457 FOG: TPR repeat. | 0.529 |
| AHM62537.1 | AHM62538.1 | D770_21440 | D770_21445 | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | C-terminal processing peptidase-3; COG0793 Periplasmic protease; Belongs to the peptidase S41A family. | 0.775 |
| AHM62537.1 | AHM62539.1 | D770_21440 | D770_21450 | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | Hypothetical protein; COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone. | 0.718 |
| AHM62537.1 | AHM62540.1 | D770_21440 | D770_21455 | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | Hypothetical protein. | 0.637 |
| AHM62537.1 | rpmH | D770_21440 | D770_21435 | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | COG0230 Ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family. | 0.942 |
| AHM62538.1 | AHM58568.1 | D770_21445 | D770_01470 | C-terminal processing peptidase-3; COG0793 Periplasmic protease; Belongs to the peptidase S41A family. | COG0739 Membrane proteins related to metalloendopeptidases. | 0.485 |
| AHM62538.1 | AHM61119.1 | D770_21445 | D770_14325 | C-terminal processing peptidase-3; COG0793 Periplasmic protease; Belongs to the peptidase S41A family. | Hypothetical protein; COG0457 FOG: TPR repeat. | 0.542 |
| AHM62538.1 | AHM61406.1 | D770_21445 | D770_15760 | C-terminal processing peptidase-3; COG0793 Periplasmic protease; Belongs to the peptidase S41A family. | Tetratricopeptide domain protein; COG0457 FOG: TPR repeat. | 0.487 |
| AHM62538.1 | AHM62537.1 | D770_21445 | D770_21440 | C-terminal processing peptidase-3; COG0793 Periplasmic protease; Belongs to the peptidase S41A family. | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.775 |
| AHM62538.1 | AHM62539.1 | D770_21445 | D770_21450 | C-terminal processing peptidase-3; COG0793 Periplasmic protease; Belongs to the peptidase S41A family. | Hypothetical protein; COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone. | 0.714 |
| AHM62538.1 | AHM62540.1 | D770_21445 | D770_21455 | C-terminal processing peptidase-3; COG0793 Periplasmic protease; Belongs to the peptidase S41A family. | Hypothetical protein. | 0.660 |
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