STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM62743.1L-fucose:H+ symporter permease; COG0738 Fucose permease. (437 aa)    
Predicted Functional Partners:
AHM62744.1
Hypothetical protein.
 
  
 0.866
AHM59458.1
Amidohydrolase 2; COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold.
 
  
 0.509
AHM62739.1
COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor).
  
    0.477
AHM62740.1
COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase).
       0.468
AHM62741.1
Stage II sporulation E family protein; COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase).
       0.468
AHM62742.1
Histidine kinase; COG0642 Signal transduction histidine kinase.
       0.468
AHM62738.1
COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor).
  
    0.414
Your Current Organism:
Flammeovirgaceae bacterium 311
NCBI taxonomy Id: 1257021
Other names: F. bacterium 311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.