STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM62856.1Hypothetical protein; COG0577 ABC-type antimicrobial peptide transport system, permease component. (786 aa)    
Predicted Functional Partners:
AHM62852.1
Phosphonate-transporting ATPase; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
   0.893
AHM62851.1
RND family efflux transporter MFP subunit; COG0845 Membrane-fusion protein.
 
   0.873
AHM62874.1
COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
   0.855
AHM62849.1
COG0642 Signal transduction histidine kinase.
 
     0.808
AHM62855.1
Hypothetical protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
   
0.799
AHM62875.1
COG1538 Outer membrane protein.
 
   0.715
AHM62854.1
Hypothetical protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
    
0.714
AHM62850.1
Two component, sigma54 specific, transcriptional regulator, Fis family protein; COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains.
 
     0.696
AHM62857.1
Hypothetical protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
    
0.622
AHM62862.1
Putative lipoprotein.
 
     0.596
Your Current Organism:
Flammeovirgaceae bacterium 311
NCBI taxonomy Id: 1257021
Other names: F. bacterium 311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.