STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM62861.1Hypothetical protein; COG0577 ABC-type antimicrobial peptide transport system, permease component. (816 aa)    
Predicted Functional Partners:
AHM62852.1
Phosphonate-transporting ATPase; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
   0.868
AHM62851.1
RND family efflux transporter MFP subunit; COG0845 Membrane-fusion protein.
 
   0.858
AHM62874.1
COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
   0.852
AHM62860.1
COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
    
0.809
AHM62849.1
COG0642 Signal transduction histidine kinase.
 
     0.798
AHM62862.1
Putative lipoprotein.
 
     0.702
AHM62875.1
COG1538 Outer membrane protein.
 
   0.673
AHM62850.1
Two component, sigma54 specific, transcriptional regulator, Fis family protein; COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains.
 
     0.638
AHM62859.1
Hypothetical protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
   
0.578
AHM63114.1
Phosphonate-transporting ATPase; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
   0.565
Your Current Organism:
Flammeovirgaceae bacterium 311
NCBI taxonomy Id: 1257021
Other names: F. bacterium 311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.