STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM62891.1Signal transduction histidine kinase LytS; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain. (343 aa)    
Predicted Functional Partners:
AHM62892.1
LytTR family two component transcriptional regulator; COG3279 Response regulator of the LytR/AlgR family.
 
   0.957
AHM58760.1
Two-component system-response regulator; COG3279 Response regulator of the LytR/AlgR family.
 
   0.816
AHM60094.1
Two component transcriptional regulator, lyttr family protein; COG3279 Response regulator of the LytR/AlgR family.
 
   0.816
AHM61559.1
LytTR family two component transcriptional regulator; COG3279 Response regulator of the LytR/AlgR family.
 
   0.816
AHM61611.1
COG3279 Response regulator of the LytR/AlgR family.
 
   0.816
AHM58809.1
LytTR family two component transcriptional regulator; COG3279 Response regulator of the LytR/AlgR family.
  
   0.812
AHM60717.1
LytTR family two component transcriptional regulator; COG3279 Response regulator of the LytR/AlgR family.
  
   0.811
AHM62054.1
COG3279 Response regulator of the LytR/AlgR family.
  
   0.811
AHM62658.1
LytTR family two component transcriptional regulator; COG3279 Response regulator of the LytR/AlgR family.
  
   0.811
AHM62939.1
LytTR family two component transcriptional regulator; COG3279 Response regulator of the LytR/AlgR family.
  
   0.811
Your Current Organism:
Flammeovirgaceae bacterium 311
NCBI taxonomy Id: 1257021
Other names: F. bacterium 311
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