STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM63088.1Hypothetical protein. (358 aa)    
Predicted Functional Partners:
AHM63089.1
Hypothetical protein.
       0.773
AHM60028.1
Hypothetical protein.
  
     0.772
AHM63090.1
RNA polymerase, sigma-24 subunit, ecf subfamily protein; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
  
    0.765
AHM60785.1
COG2849 Uncharacterized protein conserved in bacteria.
  
     0.757
AHM62156.1
Hypothetical protein.
  
     0.757
AHM58830.1
Hypothetical protein.
  
     0.739
AHM61288.1
Hypothetical protein.
 
     0.734
AHM62515.1
Hypothetical protein.
 
     0.731
AHM59530.1
Hypothetical protein.
  
     0.729
AHM63078.1
Hypothetical protein.
  
     0.705
Your Current Organism:
Flammeovirgaceae bacterium 311
NCBI taxonomy Id: 1257021
Other names: F. bacterium 311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.