STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uxuA-2Mannonate dehydratase; Catalyzes the dehydration of D-mannonate. (397 aa)    
Predicted Functional Partners:
uxaC
COG1904 Glucuronate isomerase.
 
  
 0.934
AHM58523.1
COG2721 Altronate dehydratase.
 
 
 0.933
AHM62382.1
COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
 
 0.913
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
  
  
 
0.901
AHM58483.1
COG0524 Sugar kinases, ribokinase family.
 
  
 0.871
AHM61464.1
Sugar-phosphate isomerase, rpib/laca/lacb family protein; COG0698 Ribose 5-phosphate isomerase RpiB.
   
 
  0.820
AHM62836.1
COG0698 Ribose 5-phosphate isomerase RpiB.
   
 
  0.820
AHM58843.1
COG0036 Pentose-5-phosphate-3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
     
  0.800
AHM59196.1
6-phosphogluconate dehydrogenase; COG3265 Gluconate kinase; Belongs to the 6-phosphogluconate dehydrogenase family.
     
  0.800
AHM58485.1
COG0246 Mannitol-1-phosphate/altronate dehydrogenases.
  
 0.683
Your Current Organism:
Flammeovirgaceae bacterium 311
NCBI taxonomy Id: 1257021
Other names: F. bacterium 311
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