STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM63350.1Hypothetical protein; COG0457 FOG: TPR repeat. (1297 aa)    
Predicted Functional Partners:
AHM62196.1
COG0457 FOG: TPR repeat.
 
0.639
AHM60308.1
Miro domain-containing protein; COG4886 Leucine-rich repeat (LRR) protein.
 
 
 0.629
dnaK
Chaperone protein dnak; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 0.611
AHM60260.1
WD40 repeat-containing protein; COG2319 FOG: WD40 repeat.
 
 0.604
AHM62677.1
Fibronectin type III; COG5520 O-Glycosyl hydrolase.
  
     0.557
AHM61117.1
Multidrug ABC transporter ATPase; COG1716 FOG: FHA domain.
  
 
 0.545
AHM61891.1
Hypothetical protein; COG2319 FOG: WD40 repeat.
 
 0.534
AHM58404.1
Ankyrin; COG0666 FOG: Ankyrin repeat.
 
 0.522
AHM61119.1
Hypothetical protein; COG0457 FOG: TPR repeat.
 
0.520
AHM59969.1
Hypothetical protein; COG0457 FOG: TPR repeat.
 
 
 0.519
Your Current Organism:
Flammeovirgaceae bacterium 311
NCBI taxonomy Id: 1257021
Other names: F. bacterium 311
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