STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM63414.1COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family. (369 aa)    
Predicted Functional Partners:
AHM60130.1
COG0778 Nitroreductase.
  
 
 0.907
AHM61202.1
Zn-dependent oxidoreductase; COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases.
 
  
 0.591
AHM58980.1
COG2086 Electron transfer flavoprotein, beta subunit.
  
 
 0.564
AHM58979.1
COG2025 Electron transfer flavoprotein, alpha subunit.
   
 
 0.505
AHM63413.1
COG0492 Thioredoxin reductase.
  
  
 0.475
glsA
COG2066 Glutaminase; Belongs to the glutaminase family.
       0.453
Your Current Organism:
Flammeovirgaceae bacterium 311
NCBI taxonomy Id: 1257021
Other names: F. bacterium 311
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