STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM63461.1Lipid A 3-O-deacylase, PagL superfamily protein. (380 aa)    
Predicted Functional Partners:
AHM63257.1
GAF sensor hybrid histidine kinase; COG2770 FOG: HAMP domain.
  
  
 0.817
AHM62965.1
Signal transduction histidine kinase with CheB and CheR activity; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
  
  
 0.806
AHM58790.1
Signal transduction histidine kinase with CheB and CheR activity; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
  
  
 0.747
AHM60363.1
PAS sensor protein; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
  
  
 0.747
AHM61648.1
PAS/PAC sensor hybrid histidine kinase; COG2202 FOG: PAS/PAC domain.
  
  
 0.747
AHM61685.1
Signal transduction histidine kinase with CheB and CheR activity; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
  
  
 0.747
AHM60150.1
CheA signal transduction histidine kinase; COG0643 Chemotaxis protein histidine kinase and related kinases.
  
  
 0.734
AHM63106.1
Hypothetical protein.
 
  
 0.710
AHM61318.1
COG2374 Predicted extracellular nuclease.
  
     0.642
AHM59144.1
Ompa/motb domain protein; COG1360 Flagellar motor protein.
  
  
 0.579
Your Current Organism:
Flammeovirgaceae bacterium 311
NCBI taxonomy Id: 1257021
Other names: F. bacterium 311
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