STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM63554.1COG2940 Proteins containing SET domain. (207 aa)    
Predicted Functional Partners:
atpD
ATP synthase F1 subcomplex subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 0.842
AHM58404.1
Ankyrin; COG0666 FOG: Ankyrin repeat.
    
 0.812
AHM62840.1
Hypothetical protein.
  
     0.693
AHM58951.1
COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein.
  
 0.615
AHM59709.1
COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein.
  
 0.615
AHM59085.1
Hypothetical protein.
    
 0.575
AHM61460.1
Snf2-related protein; COG0553 Superfamily II DNA/RNA helicases, SNF2 family.
   
 0.558
AHM62827.1
SNF2-like protein; COG0553 Superfamily II DNA/RNA helicases, SNF2 family.
   
 0.558
AHM59064.1
Alpha-2-macroglobulin; COG2373 Large extracellular alpha-helical protein.
   
 0.551
AHM60260.1
WD40 repeat-containing protein; COG2319 FOG: WD40 repeat.
  
 
 0.529
Your Current Organism:
Flammeovirgaceae bacterium 311
NCBI taxonomy Id: 1257021
Other names: F. bacterium 311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.