STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM63623.1COG3594 Fucose 4-O-acetylase and related acetyltransferases. (362 aa)    
Predicted Functional Partners:
AHM63615.1
PA14 domain-containing protein; COG4099 Predicted peptidase.
  
     0.772
AHM63616.1
PA14 domain-containing protein; COG4099 Predicted peptidase.
  
     0.768
AHM62880.1
PA14 domain-containing protein; COG4099 Predicted peptidase.
  
     0.767
AHM63603.1
COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
 
  
 0.752
AHM61792.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; COG1086 Predicted nucleoside-diphosphate sugar epimerases.
 
  
 0.729
AHM63622.1
Hypothetical protein.
       0.707
AHM63605.1
Hypothetical protein.
 
    0.701
AHM61608.1
Undecaprenyl-phosphate glucose phosphotransferase; COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
  
  
 0.690
AHM62226.1
Undecaprenyl-phosphate glucose phosphotransferase; COG1086 Predicted nucleoside-diphosphate sugar epimerases.
  
  
 0.690
AHM63627.1
COG1215 Glycosyltransferases, probably involved in cell wall biogenesis.
 
     0.549
Your Current Organism:
Flammeovirgaceae bacterium 311
NCBI taxonomy Id: 1257021
Other names: F. bacterium 311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.