STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_009890Glucose repression mediator protein. (426 aa)    
Predicted Functional Partners:
ACA1_264110
Ribosomal protein L3, putative; Belongs to the universal ribosomal protein uL3 family.
 
 
   0.904
ACA1_177470
ADP-sugar pyrophosphatase, putative; Belongs to the Nudix hydrolase family.
  
  0.813
ACA1_087970
NACHT domain containing protein.
    
 0.706
ACA1_089650
NACHT domain containing protein.
    
 0.706
ACA1_202490
TROVE domain containing protein.
    
 0.706
ACA1_370060
Telomeraseassociated protein 1, putative.
    
 0.706
ACA1_219080
Uncharacterized protein.
   
 0.669
ACA1_333360
Integrator complex subunit 3 isoform 1, putative.
    
 0.647
ACA1_155580
Chitin synthase.
  
 0.639
ACA1_076780
AcylCoA synthetase.
    
 0.634
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.