STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_189590Transcriptional regulatorrelated, putative. (2391 aa)    
Predicted Functional Partners:
ACA1_233080
NOT2 / NOT3 / NOT5 family protein.
   
 0.998
ACA1_115860
NOT2 / NOT3 / NOT5 family protein.
    
 0.998
ACA1_070160
Tetratricopeptide repeat-containing protein.
    
 0.998
ACA1_378890
Ccr4associated factor, putative.
   
 0.997
ACA1_271270
Atpdependent rna helicase ddx6, putative; Belongs to the DEAD box helicase family.
   
 0.984
ACA1_182290
RRM domain-containing protein.
    
 0.972
ACA1_044770
EF-hand domain-containing protein.
    
 0.957
ACA1_133440
Zinc finger domain containing protein.
    
 
 0.873
ACA1_354330
Uncharacterized protein.
   
 0.869
ACA1_354370
Nocturnin, putative.
   
 0.869
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.