STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_121520Charged multivesicular body protein 2a 2 family protein. (299 aa)    
Predicted Functional Partners:
ACA1_132870
Chromatin modifying protein 1b, putative.
   
0.998
ACA1_040760
SNF7 family protein.
   
0.994
ACA1_063700
Vacuolarsorting protein SNF7, putative.
   
 0.993
ACA1_048130
Charged multivesicular body protein, putative.
   
 0.975
ACA1_271290
Uncharacterized protein.
   
 0.972
ACA1_392150
ATPase, AAA domain containing protein; Belongs to the AAA ATPase family.
    
 0.959
ACA1_071690
Vacuolar protein sorting factor 4, putative; Belongs to the AAA ATPase family.
    
 0.959
ACA1_234070
ELL complex EAP30 subunit.
   
 0.920
ACA1_331360
EAP30/Vps36 family protein.
    
 0.918
ACA1_213340
Vacuolar proteinsorting-associated protein 25, putative.
   
 0.917
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.