STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_362540Zinc finger, C3HC4 type (RING finger) domain containing protein. (474 aa)    
Predicted Functional Partners:
ACA1_111060
Xtp3transactivated protein, putative.
   
 0.936
ACA1_116690
Uncharacterized protein.
    
 0.763
ACA1_169060
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.763
ACA1_290540
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.763
ACA1_372050
UBX domain containing protein.
    
 0.702
ACA1_138510
Legume lectins beta domain containing protein.
   
 0.622
ACA1_007310
Rad4 domain-containing protein.
   
 0.622
ACA1_374320
UBA/TSN domain containing protein.
    
 0.621
ACA1_061920
Rad23, putative.
    
 0.621
ACA1_365720
26S proteasome AAAATPase subunit RPT2a, putative; Belongs to the AAA ATPase family.
    
  0.618
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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