STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_015350Dihydrodipicolinate synthetase, putative; Belongs to the DapA family. (339 aa)    
Predicted Functional Partners:
ACA1_165650
Glutamatecysteine ligase, catalytic subunit.
    
 0.514
ACA1_165670
Glutamate-cysteine ligase.
    
 0.514
ACA1_267250
Oxidoreductase, short chain dehydrogenase/reductase superfamily protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 0.497
ACA1_260800
Aflatoxin B1 aldehyde reductase member 2, putative.
  
 0.425
ACA1_096670
Aldo/keto reductase.
  
 0.425
ACA1_314850
Aflatoxin B1 aldehyde reductase member 2, putative.
  
 0.425
ACA1_246490
Oxidoreductase, aldo/keto reductase superfamily protein.
  
 0.425
ACA1_328790
Aryl-alcohol dehydrogenase (NADP+), putative.
  
 0.425
ACA1_328770
Aldo/keto reductase.
  
 0.425
ACA1_001990
Aldoketo reductase family 7, member A3 isoform 2, putative.
  
 0.425
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.