STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_025710Ubiquitin domain containing protein. (409 aa)    
Predicted Functional Partners:
ACA1_069330
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
  
 0.967
ACA1_067910
Ribosomal protein S19, putative; Belongs to the universal ribosomal protein uS19 family.
   
 0.962
ACA1_220040
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.961
ACA1_376610
DEAD/DEAH box helicase domain containing protein.
    
  0.960
ACA1_292890
Ribosomal protein S17, putative; Belongs to the universal ribosomal protein uS17 family.
   
 0.960
ACA1_268880
Ribosomal protein S9, putative; Belongs to the universal ribosomal protein uS9 family.
  
 0.959
ACA1_174430
Ribosomal protein S15, putative; Belongs to the universal ribosomal protein uS15 family.
   
 0.959
ACA1_097000
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
   
 0.957
ACA1_181970
Ribosomal protein S17, putative.
   
 0.957
ACA1_061750
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.956
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.