STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_329510Paired amphipathic helix protein sin3, putative. (1039 aa)    
Predicted Functional Partners:
ACA1_322730
CCAAT/enhancer-binding family protein.
   
 0.833
ACA1_384660
Retinoblastoma binding protein 4 variant isoform 1, putative.
   
 0.819
ACA1_110250
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.744
ACA1_296720
Histone deacetylase 1, putative.
   
 0.744
ACA1_296610
Type-1 histone deacetylase 1, putative.
   
 0.744
ACA1_064370
AT Hook plus PHD finger transcription factor family member (Athp1), putative.
   
 
 0.741
ACA1_307480
PHDfinger domain containing protein.
   
 
 0.741
ACA1_089270
Chromatin modificationrelated protein eaf3, putative.
    
 0.627
ACA1_236130
MRG domain-containing protein.
    
 0.627
ACA1_288780
Base excision DNA repair protein, HhHGPD subfamily protein.
    
 0.593
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.