STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_077630Uncharacterized protein. (903 aa)    
Predicted Functional Partners:
ACA1_064620
Vacuolar sorting protein, putative.
   
 
 0.747
ACA1_198820
Sec34 family protein.
   
 
 0.734
ACA1_048060
Vps51/Vps67 protein.
     
 0.725
ACA1_397180
Uncharacterized protein.
     
 0.723
ACA1_178710
ADPribosylation factor related protein 1, putative; Belongs to the small GTPase superfamily. Arf family.
     
 0.716
ACA1_252880
Uncharacterized protein.
     
 0.706
ACA1_396730
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
     
 0.702
ACA1_074770
Vps52 / Sac2 family protein.
     
 0.700
ACA1_139260
GTPbinding protein.
    
 0.677
ACA1_301250
RAB36 member RAS oncogene family protein.
    
 0.677
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.