STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_093810Ras subfamily protein. (244 aa)    
Predicted Functional Partners:
ACA1_159980
Anaphase promoting complex subunit 10-like family protein, putative.
    
 0.940
ACA1_115170
Uncharacterized protein.
    
 0.787
ACA1_058790
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
    
 0.759
ACA1_091340
DENN (AEX3) domain containing protein.
    
 0.618
ACA1_202680
DENN (AEX3) domain containing protein.
    
 0.618
ACA1_177750
DENN (AEX-3) domain containing protein.
    
 0.618
ACA1_249460
UDENN domain containing protein.
    
 0.618
ACA1_060100
DENN (AEX3) domain containing protein.
    
 0.618
ACA1_333380
DENN (AEX3) domain containing protein.
    
 0.618
ACA1_295920
DENN (AEX-3) domain containing protein.
    
 0.618
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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