STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_095060Sidoreflexin. (343 aa)    
Predicted Functional Partners:
ACA1_174700
Peroxisome biosynthesis protein (Peroxine7), putative.
 
      0.701
ACA1_301540
PAP2 superfamily domain containing protein.
      
 0.525
ACA1_321370
Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
   
 
 0.460
ACA1_219430
Iron donor protein CyaY, putative.
   
 
 0.449
ACA1_236320
Cytochrome p450 superfamily protein; Belongs to the cytochrome P450 family.
   
    0.438
ACA1_194940
Uncharacterized protein.
   
    0.438
ACA1_046130
Cytochrome p450 superfamily protein; Belongs to the cytochrome P450 family.
   
    0.438
ACA1_074750
5formyltetrahydrofolate cyclo-ligase subfamily protein.
      
 0.422
ACA1_145300
Carrier superfamily protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.412
ACA1_333350
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
      
 0.412
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.