STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA1_327400Uncharacterized protein. (549 aa)    
Predicted Functional Partners:
ACA1_260090
THO complex 5, putative.
   
 0.994
ACA1_331480
Membraneassociated ring finger (C3HC4) 2, putative.
    
 0.994
ACA1_063910
Tho complex subunit 7 protein.
    
 0.994
ACA1_073270
THO complex 3 family protein.
    
 0.994
ACA1_379230
RNA recognition motif domain containing protein.
    
 0.982
ACA1_130970
THO2 protein.
   
 0.975
ACA1_210210
THO1 protein (Nuclear matrix protein p84), putative.
  
  
 
0.901
ACA1_249770
Uncharacterized protein.
  
  
 
0.901
ACA1_349660
BAT1 protein.
   
 0.898
ACA1_096940
Uncharacterized protein.
   
 0.769
Your Current Organism:
Acanthamoeba castellanii
NCBI taxonomy Id: 1257118
Other names: A. castellanii str. Neff, Acanthamoeba castellanii Neff strain, Acanthamoeba castellanii str. Neff, Acanthamoeba castellanii strain Neff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.